top of page

Item List

3D PCA

PCA analysis result or UniFrac PCoA

Alpha diversity

Calculate Simpson Index and Shannon Index

Analysis setting

Setting for Quality Control of Read data, mapping and identify a subtype

Bar chart

Sample Comparison between samples in each Class

Export GISAID

An identification result will be exported as a public database  GISAID excel file format

Export result

Hierarchical clustering

Placeholder Image

OTU

Bacterial species not found in Blast Database are also used for analysis

PCoA

Explore and to visualize similarities or dissimilarities of data

Placeholder Image

Pie chart

Pie chart or spread sheet for each class from species to Super kingdom

Result

Assembling whole segments of influenza virus and mapping for identification of a subtype

SOM

Self-Organizing Map

bottom of page